BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F08LP1|AL429437
(944 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1801 0.0
>3x_Contig1682
Length = 16889
Score = 1801 bits (906), Expect = 0.0
Identities = 936/946 (98%), Gaps = 2/946 (0%)
Strand = Plus / Minus
Query: 1 atcgatgatgttatatccatggctggaagatgacccagcctcttgctgctgtccattgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14349 atcgatgatgttatatccatggctggaagatgacccagcctcttgctgctgtccattgat 14290
Query: 61 gtcaccattggccgaaatcgtttgtctcaaaaccatttgagagctaaactttctggcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14289 gtcaccattggccgaaatcgtttgtctcaaaaccatttgagagctaaactttctggcttg 14230
Query: 121 caccaatgatttgaaattggcctgagctaggccaactctccttcctcttactgttctaag 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 14229 caccaatgatttgaaattggcctgagcaaggccaactctccttcctcttactgttctaag 14170
Query: 181 catatgtgtttagtgtaatgatgaatatttgcaaaaaaaattcttcgctgttgattccag 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14169 catatgtgtatagtgtaatgatgaatatttgcaaaaaaaattcttcgctgttgattccag 14110
Query: 241 ttccaattccgtattacttttactaccttcctagtataataaatactccgtttcggtctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14109 ttccaattccgtattacttttactaccttcctagtataataaatactccgtttcggtctc 14050
Query: 301 ggtttcggcttcggtttttgagacgtccgtttttaaaggtcaaaagcagaaagtcacctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14049 ggtttcggcttcggtttttgagacgtccgtttttaaaggtcaaaagcagaaagtcacctg 13990
Query: 361 gcaagaagaataattcaggggatccggaagtgggaatgaaaagaatttatctgtcgtctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13989 gcaagaagaataattcaggggatccggaagtgggaatgaaaagaatttatctgtcgtctt 13930
Query: 421 ggaaaaaaaaattacgatcctctagcagtttagtattaaaggagaaaaagttgtcttatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13929 ggaaaaaaaaattacgatcctctagcagtttagtattaaaggagaaaaagttgtcttatg 13870
Query: 481 ttgaacattatatatatagctatatatgtaatatatatatatatgtattgatatatttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 13869 ttgaacattatatatatagctatatatgtaatatatatatatatgtattgaaatatttat 13810
Query: 541 gcaaaccgaaataaataataatacgacaatttctgttcagttttaaacactcaaagaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13809 gcaaaccgaaataaataataatacgacaatttctgttcagttttaaacactcaaagaact 13750
Query: 601 aaaaaaaacaggaaaaaccaaagccaaatacataattaacgtctgaagggaaatggaatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13749 aaaaaaaacaggaaaaaccaaagccaaatacataattaacgtctgaagggaaatggaatc 13690
Query: 661 gcacagatttgaaaaatgactgaccgaatggaagagttagtcgctgtccggtatgtggtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13689 gcacagatttgaaaaatgactgaccgaatggaagagttagtcgctgtccggtatgtggtg 13630
Query: 721 taccgctgttgctgacgaacccgtta-gcatttttttcctctgtttcattcaacggagag 779
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 13629 taccgctgttgctgacgaacccgttaggcatttttttcctctgtttcattcaacggagag 13570
Query: 780 accaggatggaggattctgtaggggaaggggaaatagctccgatttgttccgagaaacar 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13569 accaggatggaggattctgtaggggaaggggaaatagctccgatttgttccgagaaacag 13510
Query: 840 aggtgttgcgggcggktctgagagtttttactgtttcgtgatcmcggattggcggtaacg 899
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 13509 aggtgttgcgggcggttctgagagtttttactgtttcgtgatcacggattggcggtaacg 13450
Query: 900 ggt-ccgttctcggtctaagggggmatttcgaggaggacgggtaac 944
||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 13449 ggtcccgttctcggtctaaggggacatttcgaggaggacgggtaac 13404
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,439
Number of Sequences: 1807
Number of extensions: 12439
Number of successful extensions: 367
Number of sequences better than 1.0e-20: 1
length of query: 944
length of database: 10,358,551
effective HSP length: 16
effective length of query: 928
effective length of database: 10,329,639
effective search space: 9585904992
effective search space used: 9585904992
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)